PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000909.1.g00009.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family FAR1
Protein Properties Length: 714aa    MW: 80947.9 Da    PI: 5.2815
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000909.1.g00009.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.42.6e-0959122279
                            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevt 79 
                                      Y++YA+ +GFs+ + + +++k +g i++ +f Cs+e +r+++ ++              C+a+l+v++++ ++w+ t
  FANhyb_rscf00000909.1.g00009.1  59 LYDAYARCAGFSTHVGQFTRNKPDGPIVTWEFACSREVFRKKNVES--------------CNAMLRVERKDANTWVAT 122
                                     69***************************************99887..............999999999888888755 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.1E-659120IPR004330FAR1 DNA binding domain
PfamPF105511.2E-30243335IPR018289MULE transposase domain
PfamPF044341.3E-10509554IPR007527Zinc finger, SWIM-type
PROSITE profilePS5096611.214520556IPR007527Zinc finger, SWIM-type
SMARTSM005753.2E-7531558IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 714 aa     Download sequence    Send to blast
MDSEIFLDVE VEDRESDKGV KQNANDNFAG REIITQDEDG NTKPYVGMEF ESEDAAKALY  60
DAYARCAGFS THVGQFTRNK PDGPIVTWEF ACSREVFRKK NVESCNAMLR VERKDANTWV  120
ATKHFAGATK NTAETLDVAS DAYVSMDGNH APYEPNRGGR SVSPVEPNPP ARNVGPINYT  180
GPSSRKRTLG RDAQNLLNYF KKMQAENPGF YYAIQLDDEN RMTNVFWTDA RSRTAYNYFG  240
DAVIFDTMYR PNQYQVPFAP FTGVNHHGQM VLFGCALLLD ESESSFTWLF KTWLSAMNDR  300
PPISITTDQD RAIQVAVAQV FPDTRHCICK WHILREGQER LAHIYLANPS FYGELYSCIN  360
FSEKIEDFES SWLSLLDRYD LRRNDWLQAV YNARKQWAPV YFRGTFFAAI SSNQGVRSFF  420
DGYVNQQTSI PLFFKQYERA LEHALEKEIE ADYDTICTTP VLKTPSPMEQ QAANLYTKKV  480
FAKFQEELVE TFVYTANRID EDGLVSKYRV AKYEHDDKAY IVELNVSEMK ASCSCQMFEH  540
AGILCRHILT VFTVTNVLTL PSQYILKRWT RNAKSWVGVD EQISDPQGVE ILTVRFNNLC  600
QEAIKYAEEG AVAVETYNAA MIALRDSGKR IADMKKNVAK AAPPSSHDSG SIQEESIKKV  660
PLAFGEMVPP LWPWQEALPH RFNLNDVGVP VTGINQPSMA GSIQPDGGHP DNTV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004306439.10.0PREDICTED: protein FAR1-RELATED SEQUENCE 3-like
SwissprotQ9ZVC90.0FRS3_ARATH; Protein FAR1-RELATED SEQUENCE 3
TrEMBLM5X6W30.0M5X6W3_PRUPE; Uncharacterized protein
STRINGVIT_13s0047g00330.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF4030530
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27110.20.0FAR1-related sequence 3